BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020D03SP1|AL427611
(955 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1871 0.0
>3x_Contig1800
Length = 38778
Score = 1871 bits (942), Expect = 0.0
Identities = 952/956 (99%), Gaps = 1/956 (0%)
Strand = Plus / Plus
Query: 1 gaatcacgtgacttcttcgcctctacactccacactctacacttcattcacccgtgcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25517 gaatcacgtgacttcttcgcctctacactccacactctacacttcattcacccgtgcatc 25576
Query: 61 tgtaatgctgtgtgctaccaaacatttcataacccttcctgcaattcagctatcttgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25577 tgtaatgctgtgtgctaccaaacatttcataacccttcctgcaattcagctatcttgaaa 25636
Query: 121 aggtttgtctcaaatgcagccataatccgtagttctgccgtgtcttacagcccttcgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25637 aggtttgtctcaaatgcagccataatccgtagttctgccgtgtcttacagcccttcgaga 25696
Query: 181 ctcgtgttgccaaagaattatataagcgaacttccggttagtataccttgtaggagataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25697 ctcgtgttgccaaagaattatataagcgaacttccggttagtataccttgtaggagataa 25756
Query: 241 gagaagaggcatttttaaggtaagtcgaaaaattattcaccaagatagcaactgcggaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25757 gagaagaggcatttttaaggtaagtcgaaaaattattcaccaagatagcaactgcggaca 25816
Query: 301 ggtgaggtccattacgtgctttctcctataacctttcgttaaaattcgcgattctaaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25817 ggtgaggtccattacgtgctttctcctataacctttcgttaaaattcgcgattctaaagc 25876
Query: 361 ttttaaggtgagggactataaaaggaacgaagtaagaaatagagagatgcagaagtaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25877 ttttaaggtgagggactataaaaggaacgaagtaagaaatagagagatgcagaagtaatc 25936
Query: 421 ttttctcaattggactatcatccattaaagattatactgaactttcaacaataagttaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25937 ttttctcaattggactatcatccattaaagattatactgaactttcaacaataagttaca 25996
Query: 481 agaagaattgaccataacggtaatagaataaagatgtctactagcaacgaatcgccatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25997 agaagaattgaccataacggtaatagaataaagatgtctactagcaacgaatcgccatca 26056
Query: 541 ttgaaattgaacactggagcctccatccctgttgttgggttaggtacctggaaatcacct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26057 ttgaaattgaacactggagcctccatccctgttgttgggttaggtacctggaaatcacct 26116
Query: 601 gaagaagatgcttacmacgctgttgtatcagcgttgcaaaatgggtacagacacattgac 660
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26117 gaagaagatgcttacaacgctgttgtatcagcgttgcaaaatgggtacagacacattgac 26176
Query: 661 actgcagctatctacggaaacgaagaagctgttggcaaaggtatcagagactctggtgta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26177 actgcagctatctacggaaacgaagaagctgttggcaaaggtatcagagactctggtgta 26236
Query: 721 ccaagagaagaaatctttgttaccaccaagttgtggggta-ccaacaaagagatccagag 779
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 26237 ccaagagaagaaatctttgttaccaccaagttgtggggtacccaacaaagagatccagag 26296
Query: 780 gcagctcttgatctctctttgcaaagattggggttggactacgtcgacctctacttgatt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26297 gcagctcttgatctctctttgcaaagattggggttggactacgtcgacctctacttgatt 26356
Query: 840 cactggccagttcctttgaatgccagtkctatcactgacggtaactacctaactttccca 899
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 26357 cactggccagttcctttgaatgccagttctatcactgacggtaactacctaactttccca 26416
Query: 900 agaactgctgatggaaagatcgacattgacatcgaagaatggratttcatcaaaac 955
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 26417 agaactgctgatggaaagatcgacattgacatcgaagaatggaatttcatcaaaac 26472
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6879
Number of Sequences: 1807
Number of extensions: 6879
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 955
length of database: 10,358,551
effective HSP length: 16
effective length of query: 939
effective length of database: 10,329,639
effective search space: 9699531021
effective search space used: 9699531021
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)